Summary (SnpSift 5.2 API)

java.lang.Object

org.snpsift.caseControl.Summary

public class Summary extends Object

Summarize a VCF annotated file

Author:: pcingola

Constructor Summary

Constructors

Constructor

Description

Summary()
Method Summary

Modifier and Type

Method

Description

void

count(String group, Boolean caseControl, org.snpeff.snpEffect.VariantEffect.FunctionalClass functClass, String variantAf, int increment)

String

toString(List<String> groupNames)

String

toStringTitle(List<String> groupNames)

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details
- Summary
  
  public Summary()
Method Details
- count
  
  public void count(String group, Boolean caseControl, org.snpeff.snpEffect.VariantEffect.FunctionalClass functClass, String variantAf, int increment)
- toString
  
  public String toString(List<String> groupNames)
- toStringTitle
  
  public String toStringTitle(List<String> groupNames)